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Package MKinfer6 months ago
Introduction | Confidence Intervals | Binomial Proportion | Difference of Two Binomial Proportions | Mean and SD | Difference in Means | Coefficient of Variation | Quantiles, Median and MAD | Hsu Two-Sample t-Test | Xiao Two-Sample t-Test | Bootstrap t-Test | Permutation t-Test | Intersection-Union z- and t-Test | Multiple Imputation t-Test | Multiple Imputation Wilcoxon Tests | Visualization of Mean Difference | Repeated Measures One-Way ANOVA | Volcano Plots | Bland-Altman plots | Imputation of Standard Deviations for Changes from Baseline | Pairwise Comparisons | sessionInfo | References
Package MKpower6 months ago
Introduction | Single Proportion | Welch Two-Sample t-Test | Hsu Two-Sample t-Test | Xiao Two-Sample t-Test | Permutation t-Tests | Bootstrap t-Tests | ANCOVA | Wilcoxon Rank Sum and Signed Rank Tests | Two Negative Binomial Rates | Diagnostic Test | Reference Range | Multiple Primary Endpoints (MPE) | Power and Type-I-Error Simulations | sessionInfo | References
MKdescr10 months ago
Introduction | Illustration of quantiles and box- and whisker plots | IQR | Mean Absolute Deviation | Huber-type Skipped Mean and SD | Five Number Summary | Seven Number Summary | Coefficient of Variation (CV) | Signal to Noise Ratio (SNR) | Standardized Mean Difference | z-Score | z-Factor | Box- and Whisker-Plot | Generalized Logarithm | Simulate Correlated Variables | Plot TSH, fT3 and fT4 Values | Generalized and Negative Logarithm as Transformations | Change Data from Wide to Long | sessionInfo | References
Package MKclass4 years ago
Introduction | OR, RR and Other Risk Measures | AUC | Estimation | Testing | Pairwise | PPV and NPV | Performance Measures and Scores | Optimal Cutoff | Hosmer-Lemeshow and le Cessie-van Houwelingen-Copas-Hosmer | sessionInfo
Package MKomics4 years ago
Introduction | Moderated Tests Based on Package limma | Moderated t-Test | Moderated 1-Way ANOVA | Pairwise moderated t-tests | Pairwise Comparisons | FC and logFC | Aggregating Technical Replicates | 1- and 2-Way ANOVA | Correlation Distance Matrix | MAD Matrix | Similarity Matrices | Colors for Heatmaps | String Alignment | String Distances | String Similarities | Optimal Alignment | sessionInfo | References
RFLPtools: Analysis of DNA fragment samples and standalone BLAST report files4 years ago
Introduction | RFLP data | BLAST data | sessionInfo | References
Package MKmisc7 years ago
Introduction | Descriptive Statistics | IQR | Mean Absolute Deviation | Five Number Summary | Coefficient of Variation (CV) | Signal to Noise Ratio (SNR) | Box- and Whisker-Plot | OR, RR and Other Risk Measures | Generalized Logarithm | Simulate Correlated Variables | Plot TSH, fT3 and fT4 Values | Generalized and Negative Logarithm as Transformations | Change Data from Wide to Long | Confidence Intervals | Binomial Proportion | Mean and SD | Difference in Means | Coefficient of Variation | Quantiles, Median and MAD | Relative Risk | Sample Size | Welch Two-Sample t-Test | Hsu Two-Sample t-Test | Two Negative Binomial Rates | Moderated Tests Based on Package limma | Moderated t-Test | Moderated 1-Way ANOVA | Pairwise moderated t-tests | Multiple Imputation t-Test | Imputation of Standard Deviations for Changes from Baseline | AUC | Estimation | Testing | Pairwise | Pairwise Comparisons | FC and logFC | Arbitrary Criteria | Binary Classification | PPV and NPV | Performance Measures and Scores | Optimal Cutoff | Hosmer-Lemeshow and le Cessie-van Houwelingen-Copas-Hosmer | Sample Size Calculation | Omics Data | Aggregating Technical Replicates | 1- and 2-Way ANOVA | Correlation Distance Matrix | MAD Matrix | Similarity Matrices | Colors for Heatmaps | String Alignment | String Distances | String Similarities | Optimal Alignment | sessionInfo
RandVar9 years ago